gb-io
¶
A Python interface to gb-io
, a fast GenBank parser and serializer written in Rust.
Overview¶
gb-io.py
is a Python package that provides an interface to gb-io
, a very
fast GenBank format parser and serializer implemented in Rust. It can reach
much higher speed than the Biopython or
the scikit-bio parsers.
This library has no external dependency and is available for all modern Python versions (3.7+).
Setup¶
Run pip install gb-io
in a shell to download the latest release from PyPI,
or have a look at the Installation page to find other ways
to install gb-io
.
Library¶
License¶
This library is provided under the MIT License.
The gb-io
Rust crate package was written by David Leslie
and is licensed under the terms of the MIT License.
This package vendors the source of several additional packages that are
licensed under the Apache-2.0,
MIT or
BSD-3-Clause licenses;
see the license file distributed with the source copy of each vendored
dependency for more information.
This project is in no way not affiliated, sponsored, or otherwise endorsed by the original authors. It was developed by Martin Larralde during his PhD project at the European Molecular Biology Laboratory in the Zeller team.